PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00027160-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family ZF-HD
Protein Properties Length: 89aa    MW: 9759.96 Da    PI: 8.6236
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00027160-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1054.6e-332380260
            ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
                           ++vrY eC+kNhAa++Gg+avDGC+Efm+  g+egtaaal CaACgCHRnFHRreve e
  SMil_00027160-RA_Salv 23 QTVRYGECQKNHAANIGGYAVDGCREFMAG-GAEGTAAALSCAACGCHRNFHRREVERE 80
                           579**************************9.999*********************9876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257747.0E-27189IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047701.8E-302577IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015665.1E-262677IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152325.3972776IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    Send to blast
MKKRQVVMRK ETCHRSSSNQ VIQTVRYGEC QKNHAANIGG YAVDGCREFM AGGAEGTAAA  60
LSCAACGCHR NFHRREVERE VINDTSSPS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007032530.13e-41Mini zinc finger 2 isoform 1
RefseqXP_007032531.14e-41Mini zinc finger 2 isoform 2, partial
SwissprotQ9LJW54e-36MIF2_ARATH; Mini zinc finger protein 2
TrEMBLA0A061EEU83e-41A0A061EEU8_THECC; Mini zinc finger 2 isoform 1
TrEMBLA0A061EGD24e-41A0A061EGD2_THECC; Mini zinc finger 2 isoform 2 (Fragment)
STRINGVIT_14s0108g00810.t011e-38(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA11052486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.12e-37mini zinc finger 2